Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcd2Q99JR8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd2Q99JR8 Mir7071-201ENSMUST00000184847 69 ntBASIC19.26■□□□□ 0.67
Smarcd2Q99JR8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Gm5643-201ENSMUST00000117081 966 ntBASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcd2Q99JR8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Dio3-201ENSMUST00000097228 1449 ntBASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcd2Q99JR8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Mir6982-201ENSMUST00000184354 68 ntBASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcd2Q99JR8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smarcd2Q99JR8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcd2Q99JR8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smarcd2Q99JR8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcd2Q99JR8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcd2Q99JR8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms