Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha8Q91Y12 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Pcdha8Q91Y12 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Pcdha8Q91Y12 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha8Q91Y12 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Gm43060-201ENSMUST00000200621 289 ntBASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Pcdha8Q91Y12 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha8Q91Y12 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdha8Q91Y12 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha8Q91Y12 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha8Q91Y12 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdha8Q91Y12 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha8Q91Y12 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdha8Q91Y12 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdha8Q91Y12 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdha8Q91Y12 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms