Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga9Q91XX9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga9Q91XX9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga9Q91XX9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhga9Q91XX9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga9Q91XX9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga9Q91XX9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms