Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb4Q91XX6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb4Q91XX6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb4Q91XX6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhgb4Q91XX6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhgb4Q91XX6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb4Q91XX6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb4Q91XX6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb4Q91XX6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb4Q91XX6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Gm7860-201ENSMUST00000121190 879 ntBASIC19.98■□□□□ 0.79
Pcdhgb4Q91XX6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms