Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Gm15378-201ENSMUST00000121894 207 ntBASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg4Q8VHY0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cspg4Q8VHY0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Gm10698-201ENSMUST00000182663 604 ntBASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cspg4Q8VHY0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cspg4Q8VHY0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg4Q8VHY0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg4Q8VHY0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Ank2-226ENSMUST00000189368 339 ntBASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Gm44549-201ENSMUST00000208351 577 ntBASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg4Q8VHY0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.33■□□□□ 0.21
Cspg4Q8VHY0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg4Q8VHY0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms