Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Q8VDP2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Q8VDP2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.45■□□□□ 0.54
Q8VDP2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Q8VDP2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Q8VDP2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
Q8VDP2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q8VDP2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Q8VDP2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Q8VDP2 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.44■□□□□ 0.54
Q8VDP2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.43■□□□□ 0.54
Q8VDP2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Q8VDP2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.43■□□□□ 0.54
Q8VDP2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.43■□□□□ 0.54
Q8VDP2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Q8VDP2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Q8VDP2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Q8VDP2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Q8VDP2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Q8VDP2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.42■□□□□ 0.54
Q8VDP2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.42■□□□□ 0.54
Q8VDP2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Q8VDP2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Q8VDP2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.41■□□□□ 0.54
Q8VDP2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8VDP2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.4■□□□□ 0.54
Q8VDP2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Q8VDP2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Q8VDP2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Q8VDP2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8VDP2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Q8VDP2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Q8VDP2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.39■□□□□ 0.53
Q8VDP2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Q8VDP2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Q8VDP2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Q8VDP2 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.39■□□□□ 0.53
Q8VDP2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8VDP2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.39■□□□□ 0.53
Q8VDP2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8VDP2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8VDP2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8VDP2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Q8VDP2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Q8VDP2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms