Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmc1Q8R4P5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tmc1Q8R4P5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tmc1Q8R4P5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Tmc1Q8R4P5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tmc1Q8R4P5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Tmc1Q8R4P5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tmc1Q8R4P5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.2■■□□□ 1.3
Tmc1Q8R4P5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Tmc1Q8R4P5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Tmc1Q8R4P5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmc1Q8R4P5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tmc1Q8R4P5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Tmc1Q8R4P5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Tmc1Q8R4P5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmc1Q8R4P5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
Tmc1Q8R4P5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tmc1Q8R4P5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Tmc1Q8R4P5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Tmc1Q8R4P5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmc1Q8R4P5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms