Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdt1Q8R4E9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdt1Q8R4E9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdt1Q8R4E9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdt1Q8R4E9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdt1Q8R4E9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.27■□□□□ 0.51
Cdt1Q8R4E9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdt1Q8R4E9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdt1Q8R4E9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdt1Q8R4E9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdt1Q8R4E9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms