Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h3Q8CHP0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h3Q8CHP0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h3Q8CHP0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Zc3h3Q8CHP0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Gm18101-201ENSMUST00000215769 548 ntBASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zc3h3Q8CHP0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Gm13559-201ENSMUST00000120476 863 ntBASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3h3Q8CHP0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Zc3h3Q8CHP0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3h3Q8CHP0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zc3h3Q8CHP0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Gm21814-202ENSMUST00000203277 873 ntBASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3h3Q8CHP0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Gm11539-201ENSMUST00000119837 557 ntBASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Gm13436-201ENSMUST00000120418 567 ntBASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3h3Q8CHP0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3h3Q8CHP0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Gm7889-201ENSMUST00000185591 958 ntBASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Zc3h3Q8CHP0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms