Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gm6433-201ENSMUST00000118634 875 ntBASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gm5417-201ENSMUST00000079706 384 ntBASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rp1l1Q8CGM2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rp1l1Q8CGM2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.02■□□□□ 0.79
Rp1l1Q8CGM2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rp1l1Q8CGM2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rp1l1Q8CGM2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rp1l1Q8CGM2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rp1l1Q8CGM2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rp1l1Q8CGM2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Gm11927-201ENSMUST00000118472 759 ntBASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rp1l1Q8CGM2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rp1l1Q8CGM2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms