Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.4■■□□□ 1.34
Smc4Q8CG47 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
Smc4Q8CG47 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smc4Q8CG47 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Smc4Q8CG47 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
Smc4Q8CG47 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Smc4Q8CG47 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smc4Q8CG47 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smc4Q8CG47 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smc4Q8CG47 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smc4Q8CG47 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Gm6211-202ENSMUST00000167849 925 ntBASIC23.38■■□□□ 1.33
Smc4Q8CG47 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.38■■□□□ 1.33
Smc4Q8CG47 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smc4Q8CG47 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Smc4Q8CG47 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Smc4Q8CG47 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Gm13148-201ENSMUST00000118892 745 ntBASIC23.36■■□□□ 1.33
Smc4Q8CG47 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc4Q8CG47 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Gm12441-201ENSMUST00000121806 588 ntBASIC23.35■■□□□ 1.33
Smc4Q8CG47 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc4Q8CG47 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc4Q8CG47 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.33■■□□□ 1.33
Smc4Q8CG47 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Gm4968-201ENSMUST00000071458 858 ntBASIC23.33■■□□□ 1.33
Smc4Q8CG47 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc4Q8CG47 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.33■■□□□ 1.32
Smc4Q8CG47 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Smc4Q8CG47 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.32■■□□□ 1.32
Smc4Q8CG47 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Gm5408-201ENSMUST00000197998 747 ntBASIC23.32■■□□□ 1.32
Smc4Q8CG47 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms