Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc38Q8CDN8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc38Q8CDN8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Gm27801-201ENSMUST00000184174 223 ntBASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc38Q8CDN8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc38Q8CDN8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Gm45417-201ENSMUST00000209533 758 ntBASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc38Q8CDN8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc38Q8CDN8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc38Q8CDN8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Gm7860-201ENSMUST00000121190 879 ntBASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc38Q8CDN8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms