Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Usp44Q8C2S0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp44Q8C2S0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Gm42642-201ENSMUST00000200683 355 ntBASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp44Q8C2S0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Gm42778-201ENSMUST00000199644 553 ntBASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp44Q8C2S0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp44Q8C2S0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp44Q8C2S0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Gm8495-201ENSMUST00000188740 694 ntBASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Usp44Q8C2S0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Usp44Q8C2S0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Usp44Q8C2S0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Gm26571-201ENSMUST00000181399 666 ntBASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp44Q8C2S0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Gm10849-201ENSMUST00000100397 618 ntBASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Golph3-205ENSMUST00000228671 2842 ntBASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp44Q8C2S0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Usp44Q8C2S0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms