Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ptcd1Q8C2E4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ptcd1Q8C2E4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Gm12896-201ENSMUST00000118430 226 ntBASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ptcd1Q8C2E4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ptcd1Q8C2E4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Gm5643-201ENSMUST00000117081 966 ntBASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Ptcd1Q8C2E4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Ptcd1Q8C2E4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ptcd1Q8C2E4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.39■■□□□ 1.34
Ptcd1Q8C2E4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ptcd1Q8C2E4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ptcd1Q8C2E4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptcd1Q8C2E4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.38■■□□□ 1.33
Ptcd1Q8C2E4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ptcd1Q8C2E4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ptcd1Q8C2E4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptcd1Q8C2E4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptcd1Q8C2E4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Ptcd1Q8C2E4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ptcd1Q8C2E4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms