Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ska3Q8C263 Gm7860-201ENSMUST00000121190 879 ntBASIC17.8■□□□□ 0.44
Ska3Q8C263 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Ska3Q8C263 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ska3Q8C263 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ska3Q8C263 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ska3Q8C263 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.79■□□□□ 0.44
Ska3Q8C263 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Gm8495-201ENSMUST00000188740 694 ntBASIC17.79■□□□□ 0.44
Ska3Q8C263 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.79■□□□□ 0.44
Ska3Q8C263 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ska3Q8C263 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ska3Q8C263 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.79■□□□□ 0.44
Ska3Q8C263 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ska3Q8C263 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ska3Q8C263 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.78■□□□□ 0.44
Ska3Q8C263 Gm42778-201ENSMUST00000199644 553 ntBASIC17.78■□□□□ 0.44
Ska3Q8C263 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ska3Q8C263 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ska3Q8C263 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Reep4-203ENSMUST00000226563 1444 ntBASIC17.77■□□□□ 0.44
Ska3Q8C263 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ska3Q8C263 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ska3Q8C263 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.76■□□□□ 0.43
Ska3Q8C263 Gm13234-201ENSMUST00000120010 747 ntBASIC17.76■□□□□ 0.43
Ska3Q8C263 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska3Q8C263 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska3Q8C263 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska3Q8C263 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.75■□□□□ 0.43
Ska3Q8C263 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
Ska3Q8C263 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Gm38205-201ENSMUST00000192243 258 ntBASIC17.75■□□□□ 0.43
Ska3Q8C263 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.75■□□□□ 0.43
Ska3Q8C263 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ska3Q8C263 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Ska3Q8C263 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Ska3Q8C263 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ska3Q8C263 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ska3Q8C263 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ska3Q8C263 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Ska3Q8C263 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Ska3Q8C263 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Gm42642-201ENSMUST00000200683 355 ntBASIC17.73■□□□□ 0.43
Ska3Q8C263 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska3Q8C263 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Gm18671-201ENSMUST00000214826 683 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms