Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Cps1Q8C196 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cps1Q8C196 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cps1Q8C196 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cps1Q8C196 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cps1Q8C196 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Cps1Q8C196 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC25.95■■□□□ 1.74
Cps1Q8C196 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Cps1Q8C196 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.95■■□□□ 1.74
Cps1Q8C196 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cps1Q8C196 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cps1Q8C196 Gm11643-201ENSMUST00000119578 864 ntBASIC25.94■■□□□ 1.74
Cps1Q8C196 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Cps1Q8C196 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC25.94■■□□□ 1.74
Cps1Q8C196 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cps1Q8C196 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Cps1Q8C196 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cps1Q8C196 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.94■■□□□ 1.74
Cps1Q8C196 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC25.93■■□□□ 1.74
Cps1Q8C196 AC175538.1-201ENSMUST00000225343 1269 ntBASIC25.93■■□□□ 1.74
Cps1Q8C196 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 Gm10167-201ENSMUST00000150411 1479 ntBASIC25.93■■□□□ 1.74
Cps1Q8C196 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cps1Q8C196 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC25.93■■□□□ 1.74
Cps1Q8C196 Gm15378-201ENSMUST00000121894 207 ntBASIC25.93■■□□□ 1.74
Cps1Q8C196 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC25.93■■□□□ 1.74
Cps1Q8C196 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC25.92■■□□□ 1.74
Cps1Q8C196 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cps1Q8C196 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Alkbh1-212ENSMUST00000185301 408 ntBASIC25.91■■□□□ 1.74
Cps1Q8C196 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cps1Q8C196 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cps1Q8C196 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Cps1Q8C196 CT010444.2-201ENSMUST00000217877 1629 ntBASIC25.9■■□□□ 1.74
Cps1Q8C196 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Cps1Q8C196 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cps1Q8C196 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cps1Q8C196 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.89■■□□□ 1.74
Cps1Q8C196 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cps1Q8C196 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cps1Q8C196 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC25.89■■□□□ 1.73
Cps1Q8C196 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC25.89■■□□□ 1.73
Cps1Q8C196 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC25.88■■□□□ 1.73
Cps1Q8C196 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cps1Q8C196 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Cps1Q8C196 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC25.88■■□□□ 1.73
Cps1Q8C196 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cps1Q8C196 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Cps1Q8C196 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cps1Q8C196 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Cps1Q8C196 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cps1Q8C196 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cps1Q8C196 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cps1Q8C196 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Cps1Q8C196 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cps1Q8C196 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cps1Q8C196 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cps1Q8C196 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms