Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a2Q8BY89 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a2Q8BY89 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a2Q8BY89 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Grk6-206ENSMUST00000224995 2971 ntBASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a2Q8BY89 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Slc44a2Q8BY89 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc44a2Q8BY89 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Gm12922-201ENSMUST00000120626 809 ntBASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc44a2Q8BY89 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Golgb1-201ENSMUST00000023534 498 ntBASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Gm9847-201ENSMUST00000052528 599 ntBASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc44a2Q8BY89 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc44a2Q8BY89 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 AA386476-201ENSMUST00000098781 1665 ntBASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a2Q8BY89 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a2Q8BY89 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms