Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm11Q8BUV6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Gm5812-201ENSMUST00000061073 957 ntBASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm11Q8BUV6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm11Q8BUV6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm11Q8BUV6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.08■□□□□ 0.17
Lsm11Q8BUV6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm11Q8BUV6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.08■□□□□ 0.16
Lsm11Q8BUV6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Lsm11Q8BUV6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Gm37444-201ENSMUST00000193605 439 ntBASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm11Q8BUV6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms