Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smad3Q8BUN5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad3Q8BUN5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.24■□□□□ 0.83
Smad3Q8BUN5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smad3Q8BUN5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
Smad3Q8BUN5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.21■□□□□ 0.83
Smad3Q8BUN5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad3Q8BUN5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad3Q8BUN5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Mir5122-201ENSMUST00000175004 89 ntBASIC20.19■□□□□ 0.82
Smad3Q8BUN5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad3Q8BUN5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.18■□□□□ 0.82
Smad3Q8BUN5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Gm44549-201ENSMUST00000208351 577 ntBASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad3Q8BUN5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms