Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp43Q8BUM9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp43Q8BUM9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp43Q8BUM9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp43Q8BUM9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Usp43Q8BUM9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp43Q8BUM9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp43Q8BUM9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp43Q8BUM9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.17■□□□□ 0.66
Usp43Q8BUM9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms