Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scfd1Q8BRF7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scfd1Q8BRF7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scfd1Q8BRF7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scfd1Q8BRF7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Scfd1Q8BRF7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Rab3c-203ENSMUST00000224180 967 ntBASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.76■■□□□ 1.07
Scfd1Q8BRF7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Gm20049-201ENSMUST00000219950 730 ntBASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scfd1Q8BRF7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scfd1Q8BRF7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Gm20760-201ENSMUST00000179197 648 ntBASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scfd1Q8BRF7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scfd1Q8BRF7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scfd1Q8BRF7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Scfd1Q8BRF7 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.72■■□□□ 1.07
Scfd1Q8BRF7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scfd1Q8BRF7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms