Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Mir6236-201ENSMUST00000184437 123 ntBASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Smg1Q8BKX6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Gm17971-201ENSMUST00000190239 806 ntBASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smg1Q8BKX6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smg1Q8BKX6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.22■□□□□ 0.19
Smg1Q8BKX6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.22■□□□□ 0.19
Smg1Q8BKX6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.21■□□□□ 0.19
Smg1Q8BKX6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smg1Q8BKX6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smg1Q8BKX6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Smg1Q8BKX6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smg1Q8BKX6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smg1Q8BKX6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms