Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp1Q8BJQ2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Gm22240-201ENSMUST00000175225 82 ntBASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.14■□□□□ 0.81
Usp1Q8BJQ2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp1Q8BJQ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.12■□□□□ 0.81
Usp1Q8BJQ2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Gm20049-201ENSMUST00000219950 730 ntBASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp1Q8BJQ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp1Q8BJQ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Usp1Q8BJQ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Usp1Q8BJQ2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp1Q8BJQ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.08■□□□□ 0.8
Usp1Q8BJQ2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp1Q8BJQ2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp1Q8BJQ2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms