Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp2bQ8BJF9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Chmp2bQ8BJF9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp2bQ8BJF9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp2bQ8BJF9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chmp2bQ8BJF9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp2bQ8BJF9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp2bQ8BJF9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.31■□□□□ 0.68
Chmp2bQ8BJF9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chmp2bQ8BJF9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp2bQ8BJF9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms