Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim23Q8BGX0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim23Q8BGX0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim23Q8BGX0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim23Q8BGX0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim23Q8BGX0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim23Q8BGX0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim23Q8BGX0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim23Q8BGX0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Gm6420-201ENSMUST00000193885 723 ntBASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms