Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Samm50Q8BGH2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Samm50Q8BGH2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Samm50Q8BGH2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Samm50Q8BGH2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Samm50Q8BGH2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Samm50Q8BGH2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Samm50Q8BGH2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Samm50Q8BGH2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Samm50Q8BGH2 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.13■■□□□ 1.13
Samm50Q8BGH2 Gm11421-201ENSMUST00000122124 294 ntBASIC22.13■■□□□ 1.13
Samm50Q8BGH2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Samm50Q8BGH2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Samm50Q8BGH2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Samm50Q8BGH2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Samm50Q8BGH2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Samm50Q8BGH2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Samm50Q8BGH2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Samm50Q8BGH2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Samm50Q8BGH2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Samm50Q8BGH2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Samm50Q8BGH2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Samm50Q8BGH2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms