Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim50Q810I2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim50Q810I2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim50Q810I2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Trim50Q810I2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim50Q810I2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim50Q810I2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim50Q810I2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim50Q810I2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim50Q810I2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim50Q810I2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim50Q810I2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim50Q810I2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim50Q810I2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim50Q810I2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim50Q810I2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim50Q810I2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim50Q810I2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim50Q810I2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
Trim50Q810I2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim50Q810I2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim50Q810I2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim50Q810I2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim50Q810I2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim50Q810I2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim50Q810I2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim50Q810I2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.44■□□□□ 0.54
Trim50Q810I2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim50Q810I2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Trim50Q810I2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim50Q810I2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.43■□□□□ 0.54
Trim50Q810I2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim50Q810I2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trim50Q810I2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim50Q810I2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim50Q810I2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim50Q810I2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim50Q810I2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim50Q810I2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Trim50Q810I2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms