Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrrtm4Q80XG9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrrtm4Q80XG9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Lrrtm4Q80XG9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrtm4Q80XG9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrtm4Q80XG9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrtm4Q80XG9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrtm4Q80XG9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Lrrtm4Q80XG9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrtm4Q80XG9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lrrtm4Q80XG9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lrrtm4Q80XG9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lrrtm4Q80XG9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lrrtm4Q80XG9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms