Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim36Q80WG7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim36Q80WG7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.26■□□□□ 0.51
Trim36Q80WG7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim36Q80WG7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Trim36Q80WG7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.24■□□□□ 0.51
Trim36Q80WG7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Gm43173-201ENSMUST00000202246 593 ntBASIC18.24■□□□□ 0.51
Trim36Q80WG7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim36Q80WG7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim36Q80WG7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim36Q80WG7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim36Q80WG7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.21■□□□□ 0.51
Trim36Q80WG7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim36Q80WG7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.2■□□□□ 0.5
Trim36Q80WG7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms