Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prpf40bQ80W14 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40bQ80W14 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Prpf40bQ80W14 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prpf40bQ80W14 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Gm6420-201ENSMUST00000193885 723 ntBASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Prpf40bQ80W14 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Gm13146-201ENSMUST00000118508 780 ntBASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prpf40bQ80W14 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf40bQ80W14 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf40bQ80W14 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Prpf40bQ80W14 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf40bQ80W14 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Prpf40bQ80W14 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Gm6211-202ENSMUST00000167849 925 ntBASIC21.82■■□□□ 1.08
Prpf40bQ80W14 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prpf40bQ80W14 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.81■■□□□ 1.08
Prpf40bQ80W14 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Prpf40bQ80W14 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms