Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf38bQ80SY5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Trmt13-210ENSMUST00000198454 880 ntBASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf38bQ80SY5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf38bQ80SY5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf38bQ80SY5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf38bQ80SY5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Mir6236-201ENSMUST00000184437 123 ntBASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf38bQ80SY5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf38bQ80SY5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms