Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.46■□□□□ 0.39
Pif1Q80SX8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.46■□□□□ 0.39
Pif1Q80SX8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pif1Q80SX8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pif1Q80SX8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Pif1Q80SX8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.45■□□□□ 0.38
Pif1Q80SX8 Gm7860-201ENSMUST00000121190 879 ntBASIC17.45■□□□□ 0.38
Pif1Q80SX8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.45■□□□□ 0.38
Pif1Q80SX8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pif1Q80SX8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.44■□□□□ 0.38
Pif1Q80SX8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pif1Q80SX8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Gm10252-201ENSMUST00000209541 832 ntBASIC17.43■□□□□ 0.38
Pif1Q80SX8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.43■□□□□ 0.38
Pif1Q80SX8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pif1Q80SX8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.42■□□□□ 0.38
Pif1Q80SX8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pif1Q80SX8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.41■□□□□ 0.38
Pif1Q80SX8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.41■□□□□ 0.38
Pif1Q80SX8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pif1Q80SX8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pif1Q80SX8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms