Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3d21Q7TSG5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3d21Q7TSG5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3d21Q7TSG5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3d21Q7TSG5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3d21Q7TSG5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3d21Q7TSG5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3d21Q7TSG5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Gm9988-201ENSMUST00000069786 435 ntBASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sh3d21Q7TSG5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3d21Q7TSG5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3d21Q7TSG5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3d21Q7TSG5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms