Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctdp1Q7TSG2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctdp1Q7TSG2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ctdp1Q7TSG2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctdp1Q7TSG2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctdp1Q7TSG2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctdp1Q7TSG2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctdp1Q7TSG2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctdp1Q7TSG2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctdp1Q7TSG2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ctdp1Q7TSG2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctdp1Q7TSG2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms