Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx58Q6Q899 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.55■■□□□ 1.36
Ddx58Q6Q899 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.54■■□□□ 1.36
Ddx58Q6Q899 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx58Q6Q899 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Gm26524-201ENSMUST00000192339 390 ntBASIC23.53■■□□□ 1.36
Ddx58Q6Q899 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx58Q6Q899 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx58Q6Q899 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ddx58Q6Q899 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx58Q6Q899 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx58Q6Q899 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Gm12527-201ENSMUST00000117967 564 ntBASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms