Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Six1Q62231 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.53■□□□□ 0.72
Six1Q62231 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.53■□□□□ 0.72
Six1Q62231 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Six1Q62231 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Grk6-206ENSMUST00000224995 2971 ntBASIC19.52■□□□□ 0.72
Six1Q62231 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.52■□□□□ 0.72
Six1Q62231 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Smad6-203ENSMUST00000179458 273 ntBASIC19.52■□□□□ 0.72
Six1Q62231 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six1Q62231 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.52■□□□□ 0.71
Six1Q62231 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Six1Q62231 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Six1Q62231 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six1Q62231 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Gm7860-201ENSMUST00000121190 879 ntBASIC19.5■□□□□ 0.71
Six1Q62231 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six1Q62231 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Six1Q62231 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Gm43173-201ENSMUST00000202246 593 ntBASIC19.49■□□□□ 0.71
Six1Q62231 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six1Q62231 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Six1Q62231 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Six1Q62231 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Six1Q62231 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Six1Q62231 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.48■□□□□ 0.71
Six1Q62231 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.48■□□□□ 0.71
Six1Q62231 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six1Q62231 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six1Q62231 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Six1Q62231 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Six1Q62231 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six1Q62231 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Six1Q62231 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.47■□□□□ 0.71
Six1Q62231 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Six1Q62231 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six1Q62231 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Six1Q62231 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Six1Q62231 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Six1Q62231 Rarb-207ENSMUST00000225921 2756 ntBASIC19.47■□□□□ 0.71
Six1Q62231 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Six1Q62231 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms