Protein–RNA interactions for Protein: Q62186

Ssr4, Translocon-associated protein subunit delta, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4Q62186 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ssr4Q62186 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ssr4Q62186 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssr4Q62186 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.43■□□□□ 0.7
Ssr4Q62186 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.42■□□□□ 0.7
Ssr4Q62186 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Gm715-201ENSMUST00000117865 831 ntBASIC19.42■□□□□ 0.7
Ssr4Q62186 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.42■□□□□ 0.7
Ssr4Q62186 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssr4Q62186 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Ssr4Q62186 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ssr4Q62186 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr4Q62186 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ssr4Q62186 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr4Q62186 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssr4Q62186 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr4Q62186 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssr4Q62186 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ssr4Q62186 Gm15378-201ENSMUST00000121894 207 ntBASIC19.4■□□□□ 0.7
Ssr4Q62186 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr4Q62186 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssr4Q62186 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.4■□□□□ 0.7
Ssr4Q62186 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssr4Q62186 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssr4Q62186 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr4Q62186 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssr4Q62186 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssr4Q62186 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Gm2399-201ENSMUST00000104944 225 ntBASIC19.39■□□□□ 0.69
Ssr4Q62186 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.39■□□□□ 0.69
Ssr4Q62186 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssr4Q62186 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.39■□□□□ 0.69
Ssr4Q62186 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.38■□□□□ 0.69
Ssr4Q62186 Gm10698-201ENSMUST00000182663 604 ntBASIC19.38■□□□□ 0.69
Ssr4Q62186 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.38■□□□□ 0.69
Ssr4Q62186 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.38■□□□□ 0.69
Ssr4Q62186 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.38■□□□□ 0.69
Ssr4Q62186 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssr4Q62186 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ssr4Q62186 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ssr4Q62186 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ssr4Q62186 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.37■□□□□ 0.69
Ssr4Q62186 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr4Q62186 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ssr4Q62186 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.37■□□□□ 0.69
Ssr4Q62186 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.36■□□□□ 0.69
Ssr4Q62186 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.36■□□□□ 0.69
Ssr4Q62186 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.36■□□□□ 0.69
Ssr4Q62186 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.36■□□□□ 0.69
Ssr4Q62186 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr4Q62186 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssr4Q62186 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssr4Q62186 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ssr4Q62186 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms