Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rai1Q61818 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rai1Q61818 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rai1Q61818 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.47■□□□□ 0.55
Rai1Q61818 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rai1Q61818 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rai1Q61818 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.46■□□□□ 0.55
Rai1Q61818 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.46■□□□□ 0.55
Rai1Q61818 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rai1Q61818 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rai1Q61818 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rai1Q61818 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.46■□□□□ 0.54
Rai1Q61818 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rai1Q61818 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rai1Q61818 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rai1Q61818 Gm2399-201ENSMUST00000104944 225 ntBASIC18.45■□□□□ 0.54
Rai1Q61818 Gm11249-201ENSMUST00000117071 859 ntBASIC18.45■□□□□ 0.54
Rai1Q61818 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rai1Q61818 Gm6576-201ENSMUST00000169678 883 ntBASIC18.45■□□□□ 0.54
Rai1Q61818 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rai1Q61818 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.45■□□□□ 0.54
Rai1Q61818 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rai1Q61818 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.45■□□□□ 0.54
Rai1Q61818 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rai1Q61818 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.44■□□□□ 0.54
Rai1Q61818 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rai1Q61818 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Gm7977-201ENSMUST00000193787 748 ntBASIC18.43■□□□□ 0.54
Rai1Q61818 Gm44549-201ENSMUST00000208351 577 ntBASIC18.43■□□□□ 0.54
Rai1Q61818 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.43■□□□□ 0.54
Rai1Q61818 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rai1Q61818 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.43■□□□□ 0.54
Rai1Q61818 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Rai1Q61818 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rai1Q61818 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rai1Q61818 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Rai1Q61818 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rai1Q61818 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.42■□□□□ 0.54
Rai1Q61818 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Rai1Q61818 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rai1Q61818 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rai1Q61818 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rai1Q61818 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rai1Q61818 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.41■□□□□ 0.54
Rai1Q61818 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.41■□□□□ 0.54
Rai1Q61818 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.41■□□□□ 0.54
Rai1Q61818 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.41■□□□□ 0.54
Rai1Q61818 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.41■□□□□ 0.54
Rai1Q61818 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rai1Q61818 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Gm37055-201ENSMUST00000191866 133 ntBASIC18.4■□□□□ 0.54
Rai1Q61818 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.4■□□□□ 0.54
Rai1Q61818 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.4■□□□□ 0.54
Rai1Q61818 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.4■□□□□ 0.54
Rai1Q61818 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.4■□□□□ 0.54
Rai1Q61818 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rai1Q61818 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rai1Q61818 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rai1Q61818 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Rai1Q61818 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms