Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd1Q61466 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.8■□□□□ 0.76
Smarcd1Q61466 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Smarcd1Q61466 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Gm29257-201ENSMUST00000186115 639 ntBASIC19.79■□□□□ 0.76
Smarcd1Q61466 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Golph3-202ENSMUST00000226517 2359 ntBASIC19.79■□□□□ 0.76
Smarcd1Q61466 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd1Q61466 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd1Q61466 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd1Q61466 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.77■□□□□ 0.76
Smarcd1Q61466 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd1Q61466 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Smarcd1Q61466 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.76■□□□□ 0.75
Smarcd1Q61466 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Smarcd1Q61466 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd1Q61466 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Smarcd1Q61466 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd1Q61466 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Mir5133-201ENSMUST00000174955 77 ntBASIC19.74■□□□□ 0.75
Smarcd1Q61466 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Gm10602-201ENSMUST00000098239 609 ntBASIC19.74■□□□□ 0.75
Smarcd1Q61466 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.74■□□□□ 0.75
Smarcd1Q61466 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Gm7290-201ENSMUST00000104990 617 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Gm12918-201ENSMUST00000120234 636 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Gm15710-201ENSMUST00000121821 636 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Gm5075-201ENSMUST00000196916 622 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.73■□□□□ 0.75
Smarcd1Q61466 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd1Q61466 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms