Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.94■□□□□ 0.94
Cln3Q61124 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.94■□□□□ 0.94
Cln3Q61124 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.94■□□□□ 0.94
Cln3Q61124 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.94■□□□□ 0.94
Cln3Q61124 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln3Q61124 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.94■□□□□ 0.94
Cln3Q61124 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Gm11249-201ENSMUST00000117071 859 ntBASIC20.93■□□□□ 0.94
Cln3Q61124 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.93■□□□□ 0.94
Cln3Q61124 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cln3Q61124 Gm44549-201ENSMUST00000208351 577 ntBASIC20.93■□□□□ 0.94
Cln3Q61124 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.93■□□□□ 0.94
Cln3Q61124 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln3Q61124 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln3Q61124 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.92■□□□□ 0.94
Cln3Q61124 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln3Q61124 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln3Q61124 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln3Q61124 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln3Q61124 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.91■□□□□ 0.94
Cln3Q61124 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Cln3Q61124 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln3Q61124 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln3Q61124 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln3Q61124 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln3Q61124 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.9■□□□□ 0.94
Cln3Q61124 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.9■□□□□ 0.94
Cln3Q61124 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln3Q61124 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cln3Q61124 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.89■□□□□ 0.94
Cln3Q61124 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cln3Q61124 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.89■□□□□ 0.93
Cln3Q61124 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.89■□□□□ 0.93
Cln3Q61124 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln3Q61124 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.88■□□□□ 0.93
Cln3Q61124 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cln3Q61124 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln3Q61124 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Gm10698-201ENSMUST00000182663 604 ntBASIC20.87■□□□□ 0.93
Cln3Q61124 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cln3Q61124 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln3Q61124 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Cln3Q61124 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.86■□□□□ 0.93
Cln3Q61124 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.86■□□□□ 0.93
Cln3Q61124 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Gm2399-201ENSMUST00000104944 225 ntBASIC20.86■□□□□ 0.93
Cln3Q61124 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.86■□□□□ 0.93
Cln3Q61124 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.86■□□□□ 0.93
Cln3Q61124 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cln3Q61124 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.86■□□□□ 0.93
Cln3Q61124 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cln3Q61124 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cln3Q61124 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cln3Q61124 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms