Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sim1Q61045 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sim1Q61045 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.81■□□□□ 0.6
Sim1Q61045 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.81■□□□□ 0.6
Sim1Q61045 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sim1Q61045 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.81■□□□□ 0.6
Sim1Q61045 Gm10812-201ENSMUST00000099864 546 ntBASIC18.81■□□□□ 0.6
Sim1Q61045 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sim1Q61045 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sim1Q61045 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sim1Q61045 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.8■□□□□ 0.6
Sim1Q61045 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.8■□□□□ 0.6
Sim1Q61045 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sim1Q61045 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sim1Q61045 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim1Q61045 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sim1Q61045 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Sim1Q61045 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim1Q61045 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.79■□□□□ 0.6
Sim1Q61045 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Sim1Q61045 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.78■□□□□ 0.6
Sim1Q61045 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.78■□□□□ 0.6
Sim1Q61045 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim1Q61045 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sim1Q61045 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.77■□□□□ 0.6
Sim1Q61045 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.77■□□□□ 0.6
Sim1Q61045 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sim1Q61045 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim1Q61045 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Sim1Q61045 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sim1Q61045 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.76■□□□□ 0.59
Sim1Q61045 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sim1Q61045 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.76■□□□□ 0.59
Sim1Q61045 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.76■□□□□ 0.59
Sim1Q61045 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.76■□□□□ 0.59
Sim1Q61045 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.76■□□□□ 0.59
Sim1Q61045 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sim1Q61045 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sim1Q61045 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim1Q61045 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sim1Q61045 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim1Q61045 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.75■□□□□ 0.59
Sim1Q61045 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sim1Q61045 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.75■□□□□ 0.59
Sim1Q61045 Gm13148-201ENSMUST00000118892 745 ntBASIC18.75■□□□□ 0.59
Sim1Q61045 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim1Q61045 Mir6982-201ENSMUST00000184354 68 ntBASIC18.75■□□□□ 0.59
Sim1Q61045 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.75■□□□□ 0.59
Sim1Q61045 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.75■□□□□ 0.59
Sim1Q61045 Gm7977-201ENSMUST00000193787 748 ntBASIC18.75■□□□□ 0.59
Sim1Q61045 Gm6365-201ENSMUST00000054711 744 ntBASIC18.75■□□□□ 0.59
Sim1Q61045 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sim1Q61045 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim1Q61045 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim1Q61045 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim1Q61045 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sim1Q61045 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms