Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-1Q5R1I8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-1Q5R1I8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-1Q5R1I8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Gm17082-201ENSMUST00000166043 1091 ntBASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Gm26115-201ENSMUST00000175605 87 ntBASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-1Q5R1I8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-1Q5R1I8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-1Q5R1I8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-1Q5R1I8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-1Q5R1I8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-1Q5R1I8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms