Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Nespas-201ENSMUST00000143738 1083 ntBASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-4Q5R1I0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Gm12933-201ENSMUST00000120203 872 ntBASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Gm10602-201ENSMUST00000098239 609 ntBASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-4Q5R1I0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-4Q5R1I0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-4Q5R1I0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav6d-4Q5R1I0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Gm6365-201ENSMUST00000054711 744 ntBASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-4Q5R1I0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Mir5133-201ENSMUST00000174955 77 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms