Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 AA386476-201ENSMUST00000098781 1665 ntBASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tmem40Q4FJU9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem40Q4FJU9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem40Q4FJU9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem40Q4FJU9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem40Q4FJU9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Gm6365-201ENSMUST00000054711 744 ntBASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem40Q4FJU9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Gm13148-201ENSMUST00000118892 745 ntBASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tmem40Q4FJU9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gm7290-201ENSMUST00000104990 617 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gm12918-201ENSMUST00000120234 636 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gm15710-201ENSMUST00000121821 636 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gm5075-201ENSMUST00000196916 622 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tmem40Q4FJU9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms