Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Gm10812-201ENSMUST00000099864 546 ntBASIC20.28■□□□□ 0.84
Ttc9Q3V038 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.28■□□□□ 0.84
Ttc9Q3V038 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc9Q3V038 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.84
Ttc9Q3V038 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.27■□□□□ 0.84
Ttc9Q3V038 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Mir6982-201ENSMUST00000184354 68 ntBASIC20.27■□□□□ 0.84
Ttc9Q3V038 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Ttc9Q3V038 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc9Q3V038 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc9Q3V038 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc9Q3V038 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc9Q3V038 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.25■□□□□ 0.83
Ttc9Q3V038 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc9Q3V038 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.24■□□□□ 0.83
Ttc9Q3V038 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Gm13836-201ENSMUST00000121159 501 ntBASIC20.23■□□□□ 0.83
Ttc9Q3V038 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.23■□□□□ 0.83
Ttc9Q3V038 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc9Q3V038 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc9Q3V038 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ttc9Q3V038 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.21■□□□□ 0.83
Ttc9Q3V038 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc9Q3V038 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc9Q3V038 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms