Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxr1Q3UTB7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxr1Q3UTB7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Foxr1Q3UTB7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxr1Q3UTB7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxr1Q3UTB7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxr1Q3UTB7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxr1Q3UTB7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxr1Q3UTB7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxr1Q3UTB7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxr1Q3UTB7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Gm26524-201ENSMUST00000192339 390 ntBASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxr1Q3UTB7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms