Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fam196aQ3USH1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.12■□□□□ 0.65
Fam196aQ3USH1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.11■□□□□ 0.65
Fam196aQ3USH1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.1■□□□□ 0.65
Fam196aQ3USH1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fam196aQ3USH1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.09■□□□□ 0.65
Fam196aQ3USH1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam196aQ3USH1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Fam196aQ3USH1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.08■□□□□ 0.65
Fam196aQ3USH1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Fam196aQ3USH1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Fam196aQ3USH1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Fam196aQ3USH1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fam196aQ3USH1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.07■□□□□ 0.64
Fam196aQ3USH1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam196aQ3USH1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam196aQ3USH1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms