Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Brd9Q3UQU0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.31■■□□□ 1
Brd9Q3UQU0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.31■■□□□ 1
Brd9Q3UQU0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brd9Q3UQU0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.31■■□□□ 1
Brd9Q3UQU0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.3■■□□□ 1
Brd9Q3UQU0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.3■■□□□ 1
Brd9Q3UQU0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Brd9Q3UQU0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Brd9Q3UQU0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.29■■□□□ 1
Brd9Q3UQU0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Brd9Q3UQU0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Brd9Q3UQU0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Brd9Q3UQU0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Brd9Q3UQU0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.28■■□□□ 1
Brd9Q3UQU0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.28■■□□□ 1
Brd9Q3UQU0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brd9Q3UQU0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Brd9Q3UQU0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Brd9Q3UQU0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Brd9Q3UQU0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Brd9Q3UQU0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brd9Q3UQU0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brd9Q3UQU0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brd9Q3UQU0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms