Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Arhgef40Q3UPH7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Gm44549-201ENSMUST00000208351 577 ntBASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Gm21596-201ENSMUST00000178049 1316 ntBASIC28.29■■■□□ 2.12
Arhgef40Q3UPH7 Gm10167-201ENSMUST00000150411 1479 ntBASIC28.28■■■□□ 2.12
Arhgef40Q3UPH7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Arhgef40Q3UPH7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC28.28■■■□□ 2.12
Arhgef40Q3UPH7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC28.28■■■□□ 2.12
Arhgef40Q3UPH7 Gm45640-201ENSMUST00000210665 1896 ntBASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Gm19094-201ENSMUST00000209791 1246 ntBASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Arhgef40Q3UPH7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Arhgef40Q3UPH7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
Arhgef40Q3UPH7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef40Q3UPH7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Gm2399-201ENSMUST00000104944 225 ntBASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Arhgef40Q3UPH7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC28.23■■■□□ 2.11
Arhgef40Q3UPH7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Arhgef40Q3UPH7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Arhgef40Q3UPH7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Arhgef40Q3UPH7 Gm715-201ENSMUST00000117865 831 ntBASIC28.23■■■□□ 2.11
Arhgef40Q3UPH7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Arhgef40Q3UPH7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Arhgef40Q3UPH7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Arhgef40Q3UPH7 Gm6576-201ENSMUST00000169678 883 ntBASIC28.21■■■□□ 2.11
Arhgef40Q3UPH7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Arhgef40Q3UPH7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Arhgef40Q3UPH7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Arhgef40Q3UPH7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Arhgef40Q3UPH7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Arhgef40Q3UPH7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC28.2■■■□□ 2.1
Arhgef40Q3UPH7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Arhgef40Q3UPH7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Arhgef40Q3UPH7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC28.2■■■□□ 2.1
Arhgef40Q3UPH7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Arhgef40Q3UPH7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 AC140264.2-202ENSMUST00000218746 817 ntBASIC28.18■■■□□ 2.1
Arhgef40Q3UPH7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef40Q3UPH7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms