Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Naf1Q3UMQ8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Naf1Q3UMQ8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Naf1Q3UMQ8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Naf1Q3UMQ8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Naf1Q3UMQ8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Naf1Q3UMQ8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Naf1Q3UMQ8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Naf1Q3UMQ8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Naf1Q3UMQ8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Gm12441-201ENSMUST00000121806 588 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms